Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
accessible chromatin
111
target gene predictions
35
chromatin state
1
caQTL
1
other
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
361
bed bed3+
241
bigWig
34
bed bed9+
1
bed bed9
1
bigBed bed9
Organism
396
Homo sapiens
Biosample type
373
primary cell
12
tissue
8
cell line
2
in vitro differentiated cells
Organ
130
epithelium
53
connective tissue
20
pancreas
19
intestine
14
musculature of body
13
heart
10
adrenal gland
10
skin of body
9
lung
9
stomach
9
vasculature
8
liver
6
blood vessel
6
large intestine
6
mammary gland
4
esophagus
4
eye
4
small intestine
3
extraembryonic component
3
kidney
3
lymphatic vessel
2
artery
2
bone element
2
bone marrow
2
bronchus
2
embryo
2
gonad
2
limb
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
brain
1
nerve
1
spleen
1
thymus
Project
333
ENCODE
63
AMP
Genome assembly (visualization)
396
hg19
352
GRCh38
BIOSAMPLE
TYPE
396 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
chromatin state
caQTL
other
primary cell
fibroblast
16
4
endothelial cell
12
6
pericyte cell
9
9
smooth muscle cell
8
6
excitatory neuron
12
+ See 119 more…
tissue
liver
2
1
brain
1
coronary artery
1
heart
1
islet of Langerhans
1
+ See 5 more…
cell line
BL-2 cell
1
DG-75 cell
1
EndoC_BH1
1
JVM-2 cell
1
KARPAS-422 cell
1
+ See 3 more…
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
See all biosamples
Download