Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
accessible chromatin
111
target gene predictions
62
gene expression
51
differential activity
28
eQTL
17
histone modifications
3
pQTL
2
Fine-mapped variants
2
sQTL
2
variant to gene
1
binding sites
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
385
bed bed3+
242
bigWig
106
tsv
25
txt
Organism
531
Homo sapiens
Biosample type
430
primary cell
52
tissue
31
in vitro differentiated cells
18
cell line
Organ
188
epithelium
73
pancreas
68
connective tissue
31
kidney
19
intestine
19
liver
18
heart
12
musculature of body
11
vasculature
10
adrenal gland
10
embryo
10
skin of body
9
lung
9
stomach
8
blood vessel
6
adipose tissue
6
large intestine
6
mammary gland
4
esophagus
4
eye
4
small intestine
3
bodily fluid
3
extraembryonic component
3
lymphatic vessel
2
blood
2
bronchus
2
gonad
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
bone element
1
bone marrow
1
thymus
Project
333
ENCODE
184
AMP
9
community
5
ITG
Genome assembly (visualization)
407
hg19
366
GRCh38
4
hg18
BIOSAMPLE
TYPE
531 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
eQTL
histone modifications
pQTL
Fine-mapped variants
sQTL
variant to gene
binding sites
primary cell
endothelial cell
11
6
3
fibroblast
14
4
pericyte cell
9
9
excitatory neuron
12
smooth muscle cell
6
6
+ See 151 more…
tissue
islet of Langerhans
8
2
2
2
kidney
7
1
liver
6
cartilage tissue
2
2
subcutaneous adipose tissue
3
+ See 15 more…
in vitro differentiated cells
neural progenitor cell
10
7
14
cell line
H1-hESC
8
induced pluripotent stem cell
7
EndoC_BH1
2
HepG2
1
See all biosamples
Download