Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
accessible chromatin
250
target gene predictions
114
histone modifications
91
gene expression
5
chromatin state
5
hQTL
3
eQTL
3
meQTL
3
sQTL
1
other
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
620
bed bed3+
237
bigWig
89
tsv
5
bed bed9
5
bigBed bed9
Organism
725
Homo sapiens
Biosample type
592
primary cell
63
cell line
39
in vitro differentiated cells
31
tissue
Organ
161
epithelium
69
connective tissue
51
pancreas
25
intestine
17
musculature of body
15
skin of body
14
heart
13
lung
12
adrenal gland
11
brain
11
large intestine
11
stomach
10
pituitary gland
9
embryo
9
vasculature
8
liver
8
mammary gland
6
blood vessel
6
extraembryonic component
5
small intestine
4
blood
4
bodily fluid
4
esophagus
4
eye
4
uterus
3
adipose tissue
3
gonad
3
kidney
3
limb
3
lymphatic vessel
3
ovary
3
placenta
3
thyroid gland
2
artery
2
bronchus
2
prostate gland
2
thymus
1
bone element
1
bone marrow
1
breast
1
lymph node
1
penis
1
spinal cord
1
spleen
1
vein
Project
392
AMP
333
ENCODE
Genome assembly (visualization)
633
hg19
432
GRCh38
BIOSAMPLE
TYPE
725 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
histone modifications
gene expression
chromatin state
hQTL
eQTL
meQTL
sQTL
other
primary cell
monocyte
13
84
15
2
1
1
1
CD8-positive, alpha-beta T cell
1
3
30
2
fibroblast
14
4
pericyte cell
9
9
endothelial cell
10
6
1
+ See 157 more…
cell line
EndoC_BH1
7
8
pituitary stalk
10
BJAB cell
2
Jurkat
2
MCF 10A cell
2
+ See 30 more…
in vitro differentiated cells
embryonic stem cell
5
5
dendritic cell
6
adipocyte
4
bipolar neuron
1
cardiac fibroblast
1
+ See 17 more…
tissue
islet of Langerhans
1
2
adrenal gland
2
stomach
2
adipose tissue
1
beige adipocyte
1
+ See 22 more…
See all biosamples
Download