Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
36
target gene predictions
33
chromatin state
32
candidate regulatory elements
accessible chromatin
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
68
bed bed3+
33
bed bed9
Organism
101
Homo sapiens
Biosample type
86
tissue
12
cell line
3
primary cell
Organ
225
kidney
213
lung
207
musculature of body
195
epithelium
180
brain
172
intestine
138
connective tissue
138
limb
112
heart
107
skin of body
101
large intestine
99
extraembryonic component
81
embryo
75
bodily fluid
74
vasculature
73
stomach
69
blood
59
small intestine
58
blood vessel
48
placenta
47
liver
47
pancreas
46
adrenal gland
45
mammary gland
42
bone element
39
prostate gland
39
ureter
33
thymus
30
penis
27
eye
25
gonad
24
adipose tissue
24
lymph node
24
spinal cord
23
esophagus
19
artery
18
spleen
15
lymphoid tissue
13
ovary
13
thyroid gland
13
uterus
12
mouth
12
testis
9
nerve
9
skeleton
7
bronchus
7
lymphatic vessel
6
breast
6
tongue
6
urinary bladder
6
vagina
6
vein
3
bone marrow
3
nose
Project
98
AMP
3
ENCODE
Genome assembly (visualization)
101
hg19
36
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
101 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
tissue
large intestine
13
13
12
sigmoid colon
5
5
5
transverse colon
4
4
4
colonic mucosa
2
2
2
mucosa of rectum
2
2
2
+ See 2 more…
cell line
HCT116
1
1
1
HT-29
1
1
1
SW480
1
1
1
colon epithelial cell
1
1
1
primary cell
colon epithelial cell
3
See all biosamples
Download