Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
174
target gene predictions
74
gene expression
72
accessible chromatin
56
variant allelic effects
44
chromatin state
7
eQTL
6
binding sites
5
differential activity
2
candidate regulatory elements
1
caQTL
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
317
bed bed3+
67
tsv
54
bigWig
34
bed bed9+
24
csv
11
bigBed narrowPeak
5
bed bed9
5
bigBed bed9
Organism
441
Homo sapiens
Biosample type
199
primary cell
175
cell line
34
in vitro differentiated cells
33
tissue
Organ
83
epithelium
51
embryo
51
uterus
31
liver
31
pancreas
28
blood
28
bodily fluid
23
connective tissue
19
musculature of body
19
vasculature
17
blood vessel
7
heart
6
intestine
3
large intestine
2
adipose tissue
2
esophagus
2
stomach
1
adrenal gland
1
bone element
1
bone marrow
1
brain
1
bronchus
1
eye
1
kidney
1
lung
1
lymphoid tissue
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
Project
440
AMP
1
T1D
Genome assembly (visualization)
370
hg19
235
GRCh38
BIOSAMPLE
TYPE
441 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
gene expression
accessible chromatin
variant allelic effects
chromatin state
eQTL
binding sites
differential activity
candidate regulatory elements
caQTL
primary cell
endothelial cell of hepatic sinusoid
4
4
6
hepatocyte
5
5
1
fibroblast
2
6
endothelial cell
1
3
2
1
mature neutrophil
7
+ See 70 more…
cell line
HeLa-S3
51
H1-hESC
37
HFFc6
19
K562
16
GM12878
6
+ See 26 more…
in vitro differentiated cells
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
hepatocyte(AFP)
3
pancreatic ductal cell
3
adipocyte
2
+ See 6 more…
tissue
left cardiac atrium
5
liver
1
1
1
heart left ventricle
1
1
pancreatic ductal cell
2
pancreatic stellate cell
2
+ See 19 more…
See all biosamples
Download