Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1594
candidate regulatory elements
833
histone modifications
802
target gene predictions
799
chromatin state
704
binding sites
177
gene expression
17
accessible chromatin
3
eQTL
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2522
February, 2021
2409
September, 2022
384
May, 2021
377
February, 2024
323
November, 2021
286
September, 2023
281
June, 2020
155
May, 2020
128
August, 2021
128
March, 2020
103
January, 2022
97
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
34
August, 2017
32
February, 2023
28
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3951
bed bed3+
799
bed bed9
178
tsv
83
txt
18
bigWig
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
4931
Homo sapiens
Biosample type
1998
tissue
1780
cell line
864
primary cell
289
in vitro differentiated cells
Organ
413
kidney
347
epithelium
296
musculature of body
290
brain
280
lung
235
intestine
229
connective tissue
196
limb
skin of body
156
heart
149
bodily fluid
144
large intestine
139
blood
134
embryo
132
extraembryonic component
124
vasculature
98
stomach
96
blood vessel
78
bone element
75
pancreas
75
small intestine
72
liver
70
mammary gland
68
prostate gland
66
placenta
58
penis
57
ureter
56
adrenal gland
51
lymph node
47
adipose tissue
44
eye
44
thymus
36
artery
36
gonad
33
spinal cord
31
esophagus
28
spleen
22
uterus
20
lymphoid tissue
20
testis
18
skeleton
16
mouth
16
ovary
16
thyroid gland
13
vein
12
nerve
11
bronchus
11
lymphatic vessel
9
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
4
trachea
3
nose
1
pituitary gland
Project
4931
AMP
Genome assembly (visualization)
4753
hg19
816
GRCh38
organ_slims!
skin of body
BIOSAMPLE
TYPE
4931 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
target gene predictions
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
representative DNase hypersensitivity sites
variant allelic effects
tissue
stomach
40
1
19
19
heart
37
1
19
19
1
1
kidney
29
2
14
14
1
7
brain
29
3
16
16
1
lung
33
16
16
+ See 184 more…
cell line
A549
21
1
18
18
1
MCF-7
9
2
5
5
2
K562
7
1
6
6
1
breast cancer cell
11
9
neuroblastoma cell
8
4
+ See 710 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
13
CD4-positive, alpha-beta memory T cell
14
9
9
B cell
13
8
8
CD8-positive, alpha-beta memory T cell
8
7
7
mononuclear cell
7
6
6
1
+ See 181 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
10
10
1
neural progenitor cell
5
1
4
4
adipocyte
4
1
2
2
1
1
cardiomyocytes
11
induced pluripotent stem cell
9
+ See 79 more…
See all biosamples
Download