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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
178
chromatin state
167
target gene predictions
10
eQTL
4
accessible chromatin
4
histone modifications
Date released
182
September, 2022
167
February, 2024
10
January, 2022
2
February, 2021
1
January, 2020
1
November, 2019
Available data
178
bed bed9
175
bed bed3+
4
bigWig
Organism
363
Homo sapiens
Biosample type
730
tissue
374
primary cell
363
cell line
65
in vitro differentiated cells
Organ
61
embryo
54
uterus
53
bodily fluid
51
blood
23
lung
14
skin of body
11
brain
10
bone element
9
prostate gland
8
kidney
8
liver
8
lymph node
7
mammary gland
6
intestine
6
large intestine
4
pancreas
4
penis
3
connective tissue
3
epithelium
3
musculature of body
lymphoid tissue
1
artery
1
blood vessel
1
extraembryonic component
1
eye
1
gonad
1
heart
1
limb
1
mouth
1
placenta
1
testis
1
vasculature
Project
363
AMP
Genome assembly (visualization)
2304
hg19
363
GRCh38
1
hg18
organ_slims!
lymphoid tissue
award.project!
ENCODE
BIOSAMPLE
TYPE
363 results
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Clear Filters
chromatin state
target gene predictions
eQTL
accessible chromatin
histone modifications
cell line
HeLa-S3
3
51
H1-hESC
1
37
K562
6
16
HFFc6
19
A549
18
GM12878
1
6
H9
1
6
lymphocyte
1
6
HepG2
1
1
4
iPSC derived cell line
4
2
lymphoblastoid cell line
6
MCF-7
5
CyT49
4
HUES8
4
HCT116
1
2
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
22Rv1
2
GM19238
1
1
GM19239
1
1
GM19240
1
1
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
muscle
2
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
HAP-1
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
1
SW480
1
UCSF-4
1
VCaP cell
1
WERI-Rb-1
1
WI38
1
colon carcinoma
1
colon epithelial cell
1
foreskin fibroblast
1
glomerular visceral epithelial cell
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
medulloblastoma
1
renal cell carcinoma
1
smooth muscle cell of the coronary artery
1
urothelium cell line
1
See all biosamples
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