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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
262
accessible chromatin
150
gene expression
138
target gene predictions
96
differential activity
2
caQTL
Date released
327
November, 2021
246
September, 2023
56
January, 2021
16
April, 2020
2
October, 2022
1
February, 2024
Available data
402
bed bed3+
261
bigWig
246
tsv
Organism
648
Homo sapiens
Biosample type
648
primary cell
9
cell line
5
tissue
Organ
309
epithelium
143
kidney
70
connective tissue
vasculature
38
pancreas
25
blood vessel
19
intestine
12
lung
11
musculature of body
10
adrenal gland
10
heart
10
skin of body
9
lymphatic vessel
9
stomach
6
large intestine
6
mammary gland
5
artery
5
liver
4
esophagus
4
eye
4
small intestine
3
bone element
3
bone marrow
3
bronchus
3
extraembryonic component
2
embryo
2
gonad
2
ovary
2
placenta
2
thyroid gland
2
uterus
1
thymus
Project
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
Genome assembly (visualization)
400
hg19
330
GRCh38
organ_slims!
vasculature
award.project!
AMP
BIOSAMPLE
TYPE
648 results
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table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
caQTL
primary cell
pericyte cell
10
9
endothelial cell
11
7
fibroblast
14
4
macrophage
11
2
excitatory neuron
12
smooth muscle cell
6
6
astrocyte
7
2
colon epithelial cell
3
3
pancreatic acinar cell
4
2
pancreatic alpha cell
4
2
pancreatic beta cell
4
2
pancreatic delta cell
3
3
type II pneumocyte
4
2
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
B Cell
3
2
Classical Dendritic Cell
3
2
Connecting Tubule Cell
3
2
Connecting Tubule Intercalated Cell Type A
3
2
Connecting Tubule Principal Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Cycling Endothelial Cell
3
2
Cycling Epithelial Cell
3
2
Cycling T Cell
3
2
Cytotoxic T Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Fibroblast
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
M2 Macrophage
3
2
Medullary Thick Ascending Limb Cell
3
2
Mesangial Cell
3
2
Monocyte
3
2
Monocyte-derived Cell
3
2
Myofibroblast
3
2
Natural Killer T Cell
3
2
Natural Killer T Cell Type 1
3
2
Natural Killer T Cell Type 2
3
2
Non-Classical Monocyte
3
2
Parietal Epithelial Cell
3
2
Plasma Cell
3
2
Plasmacytoid Dendritic Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Regulatory T Cell
3
2
Renin-positive Juxtaglomerular Granular Cell
3
2
T Cell
3
2
T cell
5
Transitional Principal-Intercalated Cell
3
2
cortical cell of adrenal gland
3
2
erythroblast
5
inhibitory neuron
5
pancreatic ductal cell
3
2
B cell
4
CD8-positive, alpha-beta T cell
2
2
blood vessel smooth muscle cell
2
2
enteric smooth muscle cell
2
2
gabaergic neuron
2
2
glutamatergic neuron
2
2
keratinocyte
2
2
luminal epithelial cell of mammary gland
2
2
memory B cell
2
2
skeletal muscle satellite cell
3
1
smooth muscle cell of the esophagus
2
2
type I pneumocyte
3
1
CD4-positive helper T cell
1
2
Cycling Mononuclear Phagocyte
3
Mast Cell
3
basal cell
2
1
ciliated cell
2
1
club cell
2
1
endocardial cell
2
1
enteric neuron
2
1
enterocyte
3
fibroblast of cardiac tissue
2
1
megakaryocyte
2
1
mesothelial cell
2
1
natural killer cell
2
1
oligodendrocyte precursor cell
2
1
schwann cell
2
1
skeletal muscle fiber
3
CD4-positive, alpha-beta T cell
1
1
Muller cell
2
activated CD4-positive, alpha-beta T cell
1
1
activated CD8-positive, alpha-beta T cell
1
1
alveolar macrophage
1
1
basal cell of epidermis
1
1
cardiac endothelial cell
1
1
colon goblet cell
1
1
conventional dendritic cell
1
1
eccrine cell
1
1
enterochromaffin-like cell
1
1
enterocyte of epithelium of small intestine
1
1
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
foveolar cell of stomach
1
1
granular cell of epidermis
1
1
hepatocyte
1
1
intestinal tuft cell
1
1
luteal cell
1
1
mammary gland epithelial cell
1
1
mast cell
1
1
mature NK T cell
1
1
melanocyte
1
1
mesangial cell
2
microglial cell
1
1
monocyte
1
1
myoepithelial cell
1
1
naive B cell
1
1
naive t cell
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
1
natural killer cell mediated cytotoxicity
1
1
non keratinizing barrier epithelial cell
1
1
non-classical monocyte
1
1
oligodendrocyte
1
1
pancreatic A cell
2
pancreatic polypeptide-secreting cell
1
1
pancreatic stellate cell
1
1
paneth cell
1
1
parietal cell
1
1
peptic cell
1
1
plasma cell
1
1
plasmacytoid dendritic cell
1
1
regular atrial cardiac myocyte
1
1
regulatory T cell
1
1
respiratory goblet cell
1
1
skeletal muscle fibroblast
1
1
skin fibroblast
1
1
small intestine goblet cell
1
1
stellate neuron
1
1
stomach neuroendocrine cell
1
1
stromal cell
1
1
thyroid follicular cell
1
1
type B pancreatic cell
2
type I cell of adrenal cortex
1
1
type I muscle cell
1
1
type II cell of adrenal cortex
1
1
type II muscle cell
1
1
uterine smooth muscle cell
1
1
ventricular cardiac muscle cell
1
1
adipocyte
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
endothelial cell of artery
1
enteroendocrine cell
1
erythrocyte
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
gastric goblet cell
1
glial cell
1
goblet cell
1
hepatic stellate cell
1
hepatoblast
1
islet of Langerhans
1
lung neuroendocrine cell
1
metanephros
1
myofibroblast cell
1
neuroendocrine cell
1
neuron
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
retinal bipolar neuron
1
retinal pigment epithelial cell
1
sympathetic neuron
1
trophoblast giant cell
1
ureteric bud
1
See all biosamples
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