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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
856
candidate regulatory elements
471
target gene predictions
454
chromatin state
174
accessible chromatin
91
gene expression
86
eQTL
46
histone modifications
38
Fine-mapped variants
38
variant allelic effects
31
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1242
September, 2022
556
February, 2021
66
March, 2020
52
June, 2020
48
May, 2020
46
August, 2021
41
January, 2020
39
January, 2022
31
May, 2021
30
February, 2020
26
February, 2023
26
February, 2024
26
March, 2024
17
November, 2022
13
August, 2017
9
November, 2019
8
April, 2019
6
March, 2023
5
May, 2019
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1642
bed bed3+
435
bed bed9
145
tsv
108
bigWig
25
bigBed bed9
1
bam
Organism
2301
Homo sapiens
Biosample type
2414
primary cell
2302
tissue
2273
cell line
466
in vitro differentiated cells
3
stem cell
Organ
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
42
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
vein
Project
2297
AMP
5
ITG
Genome assembly (visualization)
2151
hg19
606
GRCh38
3
hg18
organ_slims!
vein
brain
BIOSAMPLE
TYPE
2302 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
7
1
2
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
adrenal gland
28
17
14
1
1
1
placenta
26
15
14
1
1
2
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
left lung
26
13
13
liver
13
10
9
4
1
7
2
1
1
1
thymus
20
14
11
1
1
1
right lung
22
11
11
1
islet of Langerhans
1
3
6
11
13
1
2
1
2
2
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
retina
6
3
3
23
1
1
1
1
1
left kidney
18
9
9
heart left ventricle
11
7
8
3
1
1
1
2
spleen
15
8
6
2
1
1
1
adipose tissue
7
8
6
2
3
4
1
1
spinal cord
14
8
7
1
1
tibial nerve
6
3
4
3
2
2
3
2
body of pancreas
8
5
4
2
1
3
1
sigmoid colon
10
7
5
1
pancreas
5
5
3
5
1
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
ovary
8
6
4
1
1
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
pigmented layer of retina
20
psoas muscle
7
8
4
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
thyroid gland
8
5
4
1
1
tibial artery
3
2
3
3
1
2
3
2
transverse colon
8
5
4
1
1
gastrocnemius medialis
8
5
4
1
omental fat pad
5
2
2
2
2
2
3
testis
7
3
3
1
1
1
1
1
muscle of trunk
8
5
4
ascending aorta
4
2
3
1
1
1
3
1
chorionic villus
8
4
4
skeletal muscle tissue
6
3
3
1
2
1
upper lobe of left lung
7
3
3
1
1
1
endocrine pancreas
7
4
4
Peyer's patch
7
3
3
1
prostate gland
4
2
2
1
1
2
2
aorta
4
4
4
1
left cardiac atrium
2
1
6
1
1
1
left renal cortex interstitium
6
2
2
1
1
left renal pelvis
6
2
2
1
1
right renal pelvis
6
2
2
1
1
breast epithelium
5
3
2
1
esophagus muscularis mucosa
5
2
2
1
1
esophagus squamous epithelium
6
2
2
1
right renal cortex interstitium
5
2
2
1
1
thoracic aorta
4
2
3
1
1
trophoblast
4
3
2
1
1
chorion membrane
3
3
3
1
colonic mucosa
4
2
3
1
esophagus
4
3
2
1
lower leg skin
6
2
2
vagina
4
2
2
1
1
duodenal mucosa
4
2
3
eye
4
2
2
1
mucosa of rectum
4
2
3
parathyroid adenoma
5
2
2
right lobe of liver
2
1
1
1
1
3
stomach smooth muscle
4
2
3
tongue
4
2
2
1
uterus
3
2
1
1
1
1
limb
3
2
2
1
muscle layer of colon
4
2
2
muscle layer of duodenum
4
2
2
occipital lobe
1
1
1
2
1
1
1
right cardiac atrium
2
2
3
1
urinary bladder
3
2
2
1
gastroesophageal sphincter
5
1
1
superior temporal gyrus
1
1
1
2
1
1
skin of body
1
1
1
3
subcutaneous abdominal adipose tissue
5
1
umbilical cord
2
1
1
1
1
C1 segment of cervical spinal cord
1
1
3
cartilage tissue
2
1
2
gastrocnemius medialis(Muscle - Skeletal)
1
1
3
germinal matrix
2
1
2
left ventricle myocardium
1
1
3
amnion
2
1
1
bone tissue
4
cortex of kidney
1
1
1
1
embryonic facial prominence
1
1
1
1
femur
2
1
1
mucosa of stomach
2
1
1
rectum smooth muscle tissue
1
1
2
visceral abdominal adipose tissue
2
1
1
arm bone
1
1
1
germinal center
1
1
1
leg bone
1
1
1
suprapubic skin
3
hindlimb muscle
1
1
muscle of leg
2
blood
2
breast carcinoma
1
1
chorion
2
endometrium cancer
1
1
fallopian tube
1
1
first pancreatic bud
1
1
forelimb muscle
1
1
kidney epithelium
1
1
mammary gland
1
1
minor salivary gland
1
1
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
1
1
skeletal muscle
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
tissue
2
left kidney
1
omental fat pad
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
aorta wall
1
aortic valve
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endometrium
1
endothelial cell
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
left leg bone
1
metanephros
1
mitral valve
1
morula
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
parietal lobe
1
precuneus cortex
1
prostate
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
rectal smooth muscle tissue
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
1
right arm bone
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle tissue
1
supramarginal gyrus
1
synovial joint
1
thyroid
1
tissue-resident macrophage
1
tricuspid valve
1
type B pancreatic cell
1
white adipose tissue
1
white matter
1
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