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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
3
November, 2021
2
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
93
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
130
Homo sapiens
Biosample type
101
tissue
26
cell line
3
primary cell
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
127
AMP
3
ENCODE
Genome assembly (visualization)
126
hg19
38
GRCh38
organ_slims!
adrenal gland
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
130 results
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candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
colonic mucosa
4
3
1
mucosa of rectum
4
3
+ See 7 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
primary cell
colon epithelial cell
3
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