Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1626
candidate regulatory elements
1325
target gene predictions
976
histone modifications
922
chromatin state
901
accessible chromatin
814
binding sites
680
gene expression
167
differential activity
167
eQTL
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
811
September, 2022
110
September, 2023
51
March, 2023
35
August, 2017
34
May, 2022
10
February, 2024
9
May, 2019
8
April, 2019
6
January, 2020
5
May, 2021
5
October, 2019
3
May, 2020
1
February, 2023
1
November, 2019
Available data
847
bed bed9
158
tsv
40
bed bed3+
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
1089
Homo sapiens
Biosample type
495
tissue
349
primary cell
200
cell line
44
in vitro differentiated cells
1
stem cell
Organ
145
epithelium
133
kidney
75
musculature of body
72
brain
71
lung
62
connective tissue
59
intestine
51
heart
51
vasculature
50
limb
50
pancreas
40
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
21
liver
20
small intestine
16
placenta
15
bone element
15
mammary gland
adrenal gland
13
prostate gland
13
ureter
12
adipose tissue
11
thymus
10
artery
10
penis
9
eye
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
970
AMP
110
KPMP
9
community
Genome assembly (visualization)
922
hg19
847
GRCh38
organ_slims!
adrenal gland
gonad
BIOSAMPLE
TYPE
1089 results
search-icon
table-tab-icon
Clear Filters
chromatin state
differential activity
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 108 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 152 more…
cell line
A549
18
K562
7
induced pluripotent stem cell
7
MCF-7
5
EndoC_BH1
3
+ See 144 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download