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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
226
accessible chromatin
194
candidate regulatory elements
167
target gene predictions
103
chromatin state
92
differential activity
48
variant allelic effects
45
binding sites
30
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
289
September, 2022
254
February, 2021
155
September, 2023
117
November, 2021
75
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
25
May, 2020
23
August, 2021
21
January, 2020
20
January, 2021
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
3
November, 2019
2
January, 2022
2
May, 2019
2
May, 2022
1
July, 2020
Available data
711
bed bed3+
341
tsv
184
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1182
Homo sapiens
Biosample type
809
primary cell
297
tissue
50
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
881
AMP
155
KPMP
117
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
826
hg19
302
GRCh38
organ_slims!
adrenal gland
BIOSAMPLE
TYPE
1182 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 143 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
tibial nerve
2
3
6
3
4
2
3
2
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 38 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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