Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
22
gene expression
20
accessible chromatin
12
binding sites
12
histone modifications
10
target gene predictions
8
candidate regulatory elements
7
chromatin state
4
variant allelic effects
3
differential activity
Date released
28
February, 2024
22
September, 2022
16
February, 2021
5
March, 2020
5
November, 2021
4
August, 2021
4
June, 2020
4
March, 2023
3
May, 2020
2
January, 2020
2
May, 2021
1
August, 2017
1
July, 2020
1
October, 2022
Available data
66
bed bed3+
21
bigWig
21
tsv
6
bed bed9
3
csv
Organism
98
Homo sapiens
Biosample type
63
primary cell
tissue
28
cell line
7
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
93
AMP
5
ENCODE
Genome assembly (visualization)
71
hg19
45
GRCh38
1
hg18
organ_slims!
adrenal gland
biosample_type!
tissue
BIOSAMPLE
TYPE
98 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
variant allelic effects
differential activity
primary cell
hepatocyte
13
8
1
4
3
1
1
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
5
3
2
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
Download