Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
477
accessible chromatin
473
gene expression
369
target gene predictions
324
candidate regulatory elements
207
histone modifications
195
chromatin state
150
differential activity
binding sites
81
variant allelic effects
46
eQTL
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
475
September, 2022
381
February, 2021
333
November, 2021
276
September, 2023
255
May, 2021
146
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
23
January, 2020
19
April, 2020
14
February, 2020
9
August, 2018
9
November, 2022
8
October, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1480
bed bed3+
586
tsv
408
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
bed gappedPeak
3
xls
Organism
2299
Homo sapiens
Biosample type
2574
tissue
2344
primary cell
1706
cell line
432
in vitro differentiated cells
4
stem cell
Organ
786
epithelium
308
kidney
262
connective tissue
153
vasculature
122
pancreas
100
blood vessel
94
skin of body
56
liver
45
musculature of body
39
mammary gland
38
extraembryonic component
37
penis
33
brain
32
lung
29
heart
artery
23
intestine
21
embryo
21
eye
18
vein
17
lymphatic vessel
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
8
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1655
AMP
333
ENCODE
276
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1684
hg19
697
GRCh38
organ_slims!
artery
files.file_type!
bed gappedPeak
annotation_type!
binding sites
BIOSAMPLE
TYPE
2344 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
1
2
+ See 439 more…
See all biosamples
Download