Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
920
candidate regulatory elements
508
target gene predictions
501
chromatin state
159
accessible chromatin
108
eQTL
106
gene expression
85
histone modifications
68
Fine-mapped variants
44
variant allelic effects
34
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
Date released
1353
September, 2022
626
February, 2021
98
March, 2020
58
January, 2020
58
June, 2020
55
May, 2020
53
January, 2022
46
August, 2021
45
February, 2020
29
May, 2021
26
March, 2024
19
August, 2017
16
February, 2024
14
February, 2023
8
April, 2019
8
May, 2019
8
November, 2019
8
November, 2022
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1773
bed bed3+
476
bed bed9
200
tsv
93
bigWig
29
bigBed bed9
1
bam
Organism
2547
Homo sapiens
Biosample type
2549
tissue
2305
cell line
1639
primary cell
444
in vitro differentiated cells
4
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
epithelium
60
placenta
58
liver
48
thymus
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2544
AMP
5
ITG
Genome assembly (visualization)
2363
hg19
699
GRCh38
3
hg18
organ_slims!
artery
epithelium
BIOSAMPLE
TYPE
2549 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
sQTL
caQTL
other
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 237 more…
See all biosamples
Download