Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1602
candidate regulatory elements
1313
target gene predictions
967
histone modifications
903
chromatin state
893
accessible chromatin
808
binding sites
675
gene expression
165
differential activity
163
eQTL
136
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
280
June, 2020
219
November, 2021
63
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
14
May, 2022
10
February, 2021
10
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
883
bed bed3+
517
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
848
Homo sapiens
Biosample type
474
primary cell
188
tissue
162
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
artery
10
large intestine
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
626
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
885
hg19
383
GRCh38
organ_slims!
artery
extraembryonic component
BIOSAMPLE
TYPE
893 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 208 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 90 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
See all biosamples
Download