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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
175
chromatin state
166
target gene predictions
10
eQTL
4
histone modifications
2
accessible chromatin
Date released
179
September, 2022
166
February, 2024
10
January, 2022
1
February, 2021
1
January, 2020
November, 2019
Available data
175
bed bed9
172
bed bed3+
2
bigWig
Organism
357
Homo sapiens
Biosample type
697
primary cell
672
tissue
357
cell line
63
in vitro differentiated cells
Organ
61
embryo
54
uterus
53
bodily fluid
51
blood
23
lung
14
skin of body
11
brain
10
bone element
9
prostate gland
8
kidney
8
liver
8
lymph node
7
mammary gland
6
intestine
large intestine
4
penis
3
connective tissue
3
musculature of body
3
pancreas
2
epithelium
2
lymphoid tissue
artery
1
blood vessel
1
extraembryonic component
1
eye
1
gonad
1
heart
1
limb
1
mouth
1
placenta
1
testis
1
vasculature
Project
357
AMP
Genome assembly (visualization)
2272
hg19
357
GRCh38
1
hg18
organ_slims!
artery
large intestine
month_released!
November, 2019
BIOSAMPLE
TYPE
357 results
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Clear Filters
chromatin state
target gene predictions
eQTL
histone modifications
accessible chromatin
cell line
HeLa-S3
3
51
H1-hESC
1
37
K562
6
16
HFFc6
19
A549
18
GM12878
1
6
H9
1
6
lymphocyte
1
6
HepG2
1
4
1
iPSC derived cell line
4
2
lymphoblastoid cell line
6
MCF-7
5
CyT49
4
HUES8
4
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
22Rv1
2
GM18507
1
1
GM19238
1
1
GM19239
1
1
GM19240
1
1
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
muscle
2
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
HAP-1
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
1
UCSF-4
1
VCaP cell
1
WERI-Rb-1
1
WI38
1
colon carcinoma
1
foreskin fibroblast
1
glomerular visceral epithelial cell
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
medulloblastoma
1
renal cell carcinoma
1
urothelium cell line
1
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