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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1610
candidate regulatory elements
1319
target gene predictions
970
histone modifications
884
accessible chromatin
811
binding sites
118
variant allelic effects
74
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2366
February, 2021
1617
September, 2022
324
November, 2021
291
February, 2024
286
May, 2021
282
June, 2020
133
May, 2020
100
October, 2022
70
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
34
August, 2017
28
February, 2023
19
April, 2020
15
May, 2022
14
October, 2019
12
November, 2019
8
April, 2019
8
May, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5784
bed bed3+
882
tsv
838
bed bed9
532
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5773
Homo sapiens
Biosample type
2122
cell line
1771
tissue
1568
primary cell
352
in vitro differentiated cells
4
stem cell
Organ
549
epithelium
331
connective tissue
315
brain
311
kidney
284
musculature of body
239
lung
228
intestine
190
bodily fluid
183
heart
181
blood
179
limb
178
embryo
171
vasculature
165
skin of body
159
pancreas
137
large intestine
131
blood vessel
112
extraembryonic component
102
liver
98
eye
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
19
vein
18
lymphoid tissue
17
ovary
17
thyroid gland
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5415
AMP
324
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5813
hg19
811
GRCh38
1
hg18
organ_slims!
artery
stomach
BIOSAMPLE
TYPE
5819 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 759 more…
tissue
heart
37
20
1
5
1
2
2
kidney
29
14
2
10
1
1
2
1
brain
29
16
3
2
1
1
2
muscle of arm
33
16
1
1
lung
33
17
+ See 209 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 319 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
5
1
5
mesenchymal stem cell
3
3
1
1
1
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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