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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
candidate regulatory elements
81
target gene predictions
76
accessible chromatin
50
gene expression
46
chromatin state
33
differential activity
18
eQTL
17
binding sites
15
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
128
September, 2022
79
February, 2021
47
March, 2023
37
May, 2021
28
November, 2021
26
February, 2024
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
287
bed bed3+
78
tsv
62
bigWig
41
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
438
Homo sapiens
Biosample type
191
primary cell
137
tissue
101
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
388
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
342
hg19
102
GRCh38
organ_slims!
artery
penis
BIOSAMPLE
TYPE
438 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
keratinocyte
3
5
2
3
1
2
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 23 more…
tissue
islet of Langerhans
1
6
11
3
13
2
1
1
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 12 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 20 more…
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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