Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
33
target gene predictions
32
chromatin state
30
gene expression
28
accessible chromatin
16
differential activity
15
binding sites
13
variant allelic effects
4
eQTL
3
Fine-mapped variants
3
histone modifications
1
caQTL
Date released
75
September, 2022
44
February, 2021
30
September, 2023
19
February, 2024
12
January, 2020
10
May, 2020
9
November, 2021
7
March, 2020
5
June, 2020
4
March, 2023
3
April, 2020
3
January, 2022
3
March, 2024
3
October, 2022
2
October, 2019
1
August, 2017
1
August, 2021
1
February, 2020
1
February, 2023
1
May, 2021
1
November, 2019
Available data
149
bed bed3+
50
tsv
31
bed bed9
23
bigWig
6
bigBed bed9
2
txt
Organism
235
Homo sapiens
Biosample type
149
primary cell
77
tissue
7
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
193
AMP
30
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
183
hg19
72
GRCh38
organ_slims!
artery
placenta
BIOSAMPLE
TYPE
235 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
differential activity
binding sites
variant allelic effects
eQTL
Fine-mapped variants
histone modifications
caQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
+ See 22 more…
tissue
ascending aorta
4
2
3
1
1
1
1
3
aorta
4
4
4
1
esophagus muscularis mucosa
5
2
2
1
1
esophagus squamous epithelium
6
2
2
1
thoracic aorta
4
2
3
1
1
+ See 6 more…
cell line
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
vein endothelial cell
1
1
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download