Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
511
chromatin state
197
accessible chromatin
113
eQTL
109
gene expression
89
histone modifications
74
Fine-mapped variants
48
variant allelic effects
36
binding sites
5
differential activity
4
variant to gene
3
pQTL
caQTL
2
sQTL
other
Date released
1377
September, 2022
641
February, 2021
104
March, 2020
63
June, 2020
62
January, 2020
59
May, 2020
56
January, 2022
48
February, 2020
44
August, 2021
31
May, 2021
27
March, 2024
26
February, 2024
25
February, 2023
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
May, 2022
Available data
1848
bed bed3+
486
bed bed9
211
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
2645
Homo sapiens
Biosample type
2646
tissue
2450
primary cell
2157
cell line
470
in vitro differentiated cells
4
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
232
intestine
213
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
83
blood vessel
83
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
57
liver
48
thymus
41
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2641
AMP
5
ITG
Genome assembly (visualization)
2455
hg19
733
GRCh38
3
hg18
organ_slims!
blood
annotation_type!
caQTL
other
BIOSAMPLE
TYPE
2646 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
sQTL
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 258 more…
See all biosamples
Download