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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
174
Homo sapiens
Biosample type
134
tissue
34
cell line
6
primary cell
Organ
909
epithelium
637
kidney
433
brain
401
connective tissue
368
musculature of body
311
lung
289
intestine
270
pancreas
248
vasculature
242
heart
237
limb
218
bodily fluid
blood
195
skin of body
193
blood vessel
185
embryo
174
large intestine
146
liver
141
extraembryonic component
119
stomach
101
eye
89
bone element
84
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
62
lymph node
61
ureter
58
penis
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
168
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
43
GRCh38
organ_slims!
blood
biosample_type!
in vitro differentiated cells
month_released!
January, 2020
BIOSAMPLE
TYPE
174 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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