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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
229
candidate regulatory elements
195
target gene predictions
164
accessible chromatin
132
chromatin state
94
gene expression
43
binding sites
41
differential activity
37
eQTL
35
histone modifications
28
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
365
September, 2022
207
February, 2021
77
November, 2021
50
May, 2021
47
March, 2023
42
February, 2024
30
June, 2020
20
January, 2021
19
August, 2021
19
March, 2020
17
September, 2023
16
May, 2020
14
January, 2020
14
October, 2022
11
February, 2020
11
January, 2022
10
August, 2017
8
October, 2019
7
August, 2018
7
November, 2022
6
April, 2020
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2018
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
1
March, 2024
Available data
710
bed bed3+
133
tsv
121
bed bed9
117
bigWig
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1017
Homo sapiens
Biosample type
414
primary cell
388
tissue
161
cell line
53
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
891
AMP
77
ENCODE
20
T1D
15
KPMP
6
LungMap
4
ITG
4
community
Genome assembly (visualization)
861
hg19
258
GRCh38
2
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
1017 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
differential activity
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
pancreatic ductal cell
3
6
3
1
3
2
1
pancreatic beta cell
3
8
3
3
1
osteoblast
2
2
5
1
2
3
2
+ See 62 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
1
11
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
adipose tissue
7
8
2
6
3
1
4
1
+ See 20 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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