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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
accessible chromatin
69
target gene predictions
61
candidate regulatory elements
49
gene expression
37
chromatin state
33
differential activity
17
binding sites
15
eQTL
12
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
101
September, 2022
64
February, 2021
47
March, 2023
35
May, 2021
27
February, 2024
24
November, 2021
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
3
October, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
250
bed bed3+
77
tsv
60
bigWig
32
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
388
Homo sapiens
Biosample type
172
primary cell
134
tissue
76
cell line
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
342
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
296
hg19
87
GRCh38
organ_slims!
blood
BIOSAMPLE
TYPE
388 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 17 more…
tissue
islet of Langerhans
6
1
11
3
2
13
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
Peyer's patch
1
3
7
3
+ See 10 more…
cell line
MCF-7
1
6
9
5
3
2
EndoC_BH1
8
1
8
3
1
T47D
2
3
2
GM18507
1
2
1
1
1
Panc1
2
2
1
+ See 5 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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