Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
candidate regulatory elements
57
target gene predictions
48
chromatin state
18
binding sites
17
accessible chromatin
13
histone modifications
4
variant allelic effects
3
eQTL
2
gene expression
Date released
141
September, 2022
86
February, 2021
10
November, 2021
9
June, 2020
5
May, 2021
4
October, 2022
3
January, 2020
3
January, 2022
3
May, 2020
2
March, 2024
1
August, 2017
1
February, 2024
Available data
216
bed bed3+
47
bed bed9
8
bigWig
2
tsv
Organism
268
Homo sapiens
Biosample type
100
primary cell
89
tissue
70
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
258
AMP
10
ENCODE
Genome assembly (visualization)
263
hg19
63
GRCh38
organ_slims!
blood
mouth
BIOSAMPLE
TYPE
268 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
eQTL
gene expression
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 8 more…
tissue
renal pelvis
19
9
9
2
1
left renal pelvis
6
2
2
1
1
right renal pelvis
6
2
2
1
1
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 5 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
iPS DF 19.7
2
1
1
+ See 15 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download