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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1646
candidate regulatory elements
1341
target gene predictions
971
histone modifications
929
chromatin state
898
accessible chromatin
809
binding sites
679
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
819
September, 2022
110
September, 2023
51
March, 2023
35
August, 2017
33
May, 2022
10
February, 2024
9
May, 2019
8
April, 2019
6
January, 2020
5
May, 2021
5
October, 2019
3
May, 2020
1
February, 2023
1
November, 2019
Available data
855
bed bed9
158
tsv
40
bed bed3+
40
bigBed bed9
33
bed bed9+
2
bigWig
1
bam
Organism
1096
Homo sapiens
Biosample type
513
tissue
347
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
145
epithelium
133
kidney
75
musculature of body
72
brain
71
lung
62
connective tissue
59
intestine
51
heart
51
vasculature
50
limb
50
pancreas
40
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
21
liver
20
small intestine
16
placenta
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
12
adipose tissue
11
thymus
10
artery
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
bone marrow
2
breast
2
bronchus
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
977
AMP
110
KPMP
9
community
Genome assembly (visualization)
929
hg19
855
GRCh38
organ_slims!
bone element
bone marrow
BIOSAMPLE
TYPE
1096 results
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Clear Filters
chromatin state
differential activity
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 108 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 150 more…
cell line
A549
18
K562
7
induced pluripotent stem cell
7
MCF-7
5
EndoC_BH1
3
+ See 135 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
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