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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1560
candidate regulatory elements
1281
target gene predictions
929
histone modifications
872
chromatin state
871
accessible chromatin
801
binding sites
664
gene expression
167
differential activity
140
eQTL
123
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
268
June, 2020
222
November, 2021
114
May, 2020
105
February, 2024
47
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
February, 2021
12
November, 2019
9
October, 2019
6
September, 2022
3
January, 2022
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
975
bed bed3+
511
bigWig
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
948
Homo sapiens
Biosample type
549
primary cell
212
tissue
158
cell line
74
in vitro differentiated cells
Organ
253
epithelium
104
connective tissue
76
pancreas
66
kidney
61
eye
brain
51
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
12
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
nerve
4
bronchus
4
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
723
AMP
222
ENCODE
30
T1D
19
LungMap
Genome assembly (visualization)
977
hg19
371
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
994 results
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table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 222 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 85 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 140 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 33 more…
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