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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
gene expression
114
accessible chromatin
96
candidate regulatory elements
61
target gene predictions
51
chromatin state
41
binding sites
39
variant allelic effects
28
differential activity
27
histone modifications
3
eQTL
2
caQTL
Date released
192
February, 2021
145
September, 2022
76
February, 2024
36
March, 2023
34
May, 2021
24
June, 2020
23
August, 2021
15
November, 2022
13
May, 2020
12
February, 2023
12
January, 2020
9
February, 2020
6
August, 2018
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
379
bed bed3+
169
tsv
79
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
622
Homo sapiens
Biosample type
497
primary cell
61
tissue
38
cell line
26
in vitro differentiated cells
Organ
638
epithelium
509
kidney
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
622
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
430
hg19
103
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
622 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 83 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
1
1
keratinocyte
3
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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