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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
551
gene expression
543
accessible chromatin
431
target gene predictions
398
candidate regulatory elements
304
histone modifications
237
chromatin state
152
differential activity
136
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
640
February, 2021
580
September, 2022
333
November, 2021
295
May, 2021
283
September, 2023
183
February, 2024
86
May, 2020
73
August, 2021
73
June, 2020
56
January, 2021
55
March, 2023
40
May, 2022
39
January, 2022
29
October, 2022
27
November, 2022
19
April, 2020
18
January, 2020
16
February, 2020
15
March, 2020
10
August, 2017
9
August, 2018
9
October, 2019
5
February, 2023
3
November, 2019
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1910
bed bed3+
665
tsv
413
bigWig
200
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2858
Homo sapiens
Biosample type
2436
primary cell
tissue
cell line
466
in vitro differentiated cells
stem cell
Organ
845
epithelium
333
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
52
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2209
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
2
community
Genome assembly (visualization)
2154
hg19
759
GRCh38
organ_slims!
brain
biosample_type!
stem cell
tissue
cell line
BIOSAMPLE
TYPE
2904 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 441 more…
in vitro differentiated cells
neural progenitor cell
7
10
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
1
4
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 118 more…
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