Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
789
histone modifications
745
target gene predictions
732
binding sites
629
accessible chromatin
625
candidate regulatory elements
499
gene expression
373
chromatin state
162
differential activity
78
variant allelic effects
54
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1735
February, 2021
984
September, 2022
333
November, 2021
320
February, 2024
308
May, 2021
281
September, 2023
195
June, 2020
95
October, 2022
81
May, 2020
64
March, 2023
56
January, 2021
51
August, 2021
47
January, 2022
47
May, 2022
19
April, 2020
16
February, 2020
16
January, 2020
12
March, 2020
11
August, 2017
9
August, 2018
9
November, 2022
7
October, 2019
5
February, 2023
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
1
November, 2019
Available data
3623
bed bed3+
611
tsv
406
bigWig
328
bed bed9
108
txt
34
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4664
Homo sapiens
Biosample type
2434
primary cell
2303
tissue
2275
cell line
466
in vitro differentiated cells
3
stem cell
Organ
862
epithelium
350
kidney
312
connective tissue
214
bodily fluid
204
blood
180
vasculature
170
skin of body
160
pancreas
149
embryo
130
lung
120
blood vessel
brain
91
liver
82
mammary gland
70
uterus
67
bone element
67
musculature of body
63
prostate gland
62
lymph node
57
intestine
56
penis
43
extraembryonic component
40
heart
40
large intestine
33
artery
33
eye
22
vein
19
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
4008
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
Genome assembly (visualization)
4001
hg19
1049
GRCh38
1
hg18
organ_slims!
brain
BIOSAMPLE
TYPE
4709 results
search-icon
table-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
86
2
1
18
15
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
5
4
7
3
1
B cell
10
6
14
2
8
endothelial cell
1
7
2
15
9
2
1
2
+ See 440 more…
cell line
HeLa-S3
55
1
5
3
A549
1
19
2
1
21
18
H1-hESC
1
39
2
1
1
8
1
K562
1
23
2
1
7
7
MCF-7
2
6
3
1
9
5
+ See 751 more…
See all biosamples
Download