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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
target gene predictions
160
chromatin state
10
eQTL
4
accessible chromatin
4
histone modifications
Date released
168
February, 2024
164
September, 2022
10
January, 2022
2
February, 2021
1
January, 2020
1
November, 2019
Available data
176
bed bed3+
160
bed bed9
4
bigWig
Organism
346
Homo sapiens
Biosample type
695
primary cell
606
tissue
346
cell line
64
in vitro differentiated cells
Organ
61
embryo
54
uterus
53
bodily fluid
51
blood
23
lung
14
skin of body
brain
10
bone element
9
prostate gland
8
kidney
8
liver
lymph node
7
mammary gland
6
intestine
6
large intestine
4
pancreas
4
penis
3
connective tissue
3
epithelium
3
musculature of body
2
lymphoid tissue
1
artery
1
blood vessel
1
extraembryonic component
1
eye
1
gonad
1
heart
1
limb
1
mouth
1
placenta
1
testis
1
vasculature
Project
346
AMP
Genome assembly (visualization)
2171
hg19
346
GRCh38
1
hg18
organ_slims!
brain
lymph node
BIOSAMPLE
TYPE
346 results
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Clear Filters
target gene predictions
chromatin state
eQTL
accessible chromatin
histone modifications
cell line
HeLa-S3
51
3
H1-hESC
37
1
K562
16
6
HFFc6
19
A549
18
GM12878
6
1
H9
6
1
lymphocyte
6
1
HepG2
1
1
4
iPSC derived cell line
4
2
lymphoblastoid cell line
6
MCF-7
5
CyT49
4
HUES8
4
HCT116
2
1
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
22Rv1
2
GM18507
1
1
GM19238
1
1
GM19239
1
1
GM19240
1
1
LNCaP clone FGC
2
NAMALWA cell
2
T47D
2
muscle
2
8988T
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DOHH2
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H7-hESC
1
HAP-1
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
MG63
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SU-DHL-6
1
SW480
1
UCSF-4
1
VCaP cell
1
WERI-Rb-1
1
WI38
1
colon carcinoma
1
colon epithelial cell
1
foreskin fibroblast
1
glomerular visceral epithelial cell
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
renal cell carcinoma
1
smooth muscle cell of the coronary artery
1
urothelium cell line
1
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