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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1551
candidate regulatory elements
1138
target gene predictions
928
histone modifications
798
binding sites
599
accessible chromatin
492
gene expression
135
eQTL
122
variant allelic effects
69
chromatin state
48
differential activity
38
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2472
February, 2021
1550
September, 2022
376
February, 2024
373
May, 2021
266
June, 2020
133
May, 2020
123
August, 2021
92
October, 2022
90
March, 2020
86
January, 2022
61
March, 2023
55
January, 2020
49
May, 2022
46
February, 2020
44
November, 2022
31
February, 2023
29
August, 2017
28
March, 2024
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5182
bed bed3+
bed bed9
549
tsv
256
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5905
Homo sapiens
Biosample type
2092
cell line
1848
tissue
1581
primary cell
426
in vitro differentiated cells
3
stem cell
Organ
588
epithelium
432
kidney
brain
343
connective tissue
293
musculature of body
229
lung
224
pancreas
215
intestine
199
heart
194
limb
193
bodily fluid
190
vasculature
186
embryo
184
blood
160
skin of body
152
blood vessel
137
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
72
bone element
67
mammary gland
65
prostate gland
62
artery
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
testis
21
nerve
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
11
breast
11
bronchus
10
lymphatic vessel
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5951
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5304
hg19
583
GRCh38
4
hg18
organ_slims!
brain
testis
files.file_type!
bed bed9
BIOSAMPLE
TYPE
5951 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
chromatin state
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
1
EndoC_BH1
1
1
1
8
8
1
1
+ See 750 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
1
10
7
1
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 198 more…
primary cell
monocyte
1
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
1
common myeloid progenitor, CD34-positive
27
14
hepatocyte
1
2
4
1
7
13
2
B cell
14
10
2
2
+ See 313 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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