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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1464
candidate regulatory elements
1161
target gene predictions
901
histone modifications
760
binding sites
655
accessible chromatin
78
variant allelic effects
31
chromatin state
11
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2193
February, 2021
1459
September, 2022
257
May, 2021
244
June, 2020
235
February, 2024
206
November, 2021
113
May, 2020
90
October, 2022
41
August, 2021
41
March, 2020
38
January, 2020
36
January, 2021
26
November, 2022
25
August, 2017
20
February, 2023
13
May, 2022
12
April, 2020
12
November, 2019
4
January, 2022
4
October, 2019
3
September, 2018
2
November, 2020
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5081
bed bed3+
755
bed bed9
507
tsv
351
bigWig
34
bed bed9+
32
bigBed bed9
30
txt
18
csv
2
bigBed narrowPeak
1
bam
Organism
5035
Homo sapiens
Biosample type
2031
cell line
1588
tissue
1130
primary cell
327
in vitro differentiated cells
3
stem cell
Organ
epithelium
330
connective tissue
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4822
AMP
206
ENCODE
40
T1D
12
LungMap
1
ITG
Genome assembly (visualization)
5074
hg19
606
GRCh38
1
hg18
organ_slims!
brain
epithelium
BIOSAMPLE
TYPE
5081 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 737 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 144 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
CD14-positive monocyte
8
19
+ See 226 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 95 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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