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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
922
histone modifications
860
accessible chromatin
798
binding sites
779
candidate regulatory elements
662
gene expression
504
target gene predictions
167
differential activity
137
eQTL
123
variant allelic effects
99
chromatin state
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2468
February, 2021
September, 2022
377
February, 2024
377
May, 2021
331
November, 2021
283
September, 2023
264
June, 2020
136
May, 2020
128
August, 2021
94
October, 2022
89
March, 2020
85
January, 2022
70
March, 2023
60
January, 2020
56
January, 2021
49
May, 2022
46
February, 2020
44
November, 2022
32
February, 2023
29
August, 2017
27
March, 2024
19
April, 2020
14
October, 2019
13
November, 2019
9
August, 2018
8
April, 2019
5
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4035
bed bed3+
829
tsv
520
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
30
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5079
Homo sapiens
Biosample type
1955
primary cell
1762
cell line
1043
tissue
361
in vitro differentiated cells
3
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4421
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4189
hg19
935
GRCh38
4
hg18
organ_slims!
brain
gonad
month_released!
September, 2022
BIOSAMPLE
TYPE
5126 results
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Clear Filters
histone modifications
accessible chromatin
binding sites
candidate regulatory elements
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 429 more…
cell line
HeLa-S3
1
2
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
2
1
17
1
breast cancer cell
11
9
+ See 732 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
1
15
7
1
1
2
heart
1
5
1
18
3
1
2
2
retina
1
23
1
3
1
1
1
stomach
1
3
21
1
2
1
+ See 195 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
1
2
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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