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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1523
candidate regulatory elements
1257
target gene predictions
922
histone modifications
836
accessible chromatin
785
binding sites
108
variant allelic effects
33
chromatin state
10
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2267
February, 2021
1519
September, 2022
330
November, 2021
283
February, 2024
271
May, 2021
263
June, 2020
116
May, 2020
93
October, 2022
56
January, 2021
52
August, 2021
44
January, 2020
41
November, 2022
40
March, 2020
27
August, 2017
27
February, 2023
17
April, 2020
15
May, 2022
10
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5496
bed bed3+
784
tsv
777
bed bed9
503
bigWig
108
txt
34
bed bed9+
26
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5450
Homo sapiens
Biosample type
2054
cell line
1595
tissue
1498
primary cell
344
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
330
connective tissue
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5088
AMP
330
ENCODE
60
T1D
17
LungMap
1
ITG
Genome assembly (visualization)
5491
hg19
752
GRCh38
1
hg18
organ_slims!
brain
blood vessel
BIOSAMPLE
TYPE
5496 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 744 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 155 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 308 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 100 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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