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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1542
candidate regulatory elements
1272
target gene predictions
925
histone modifications
chromatin state
812
accessible chromatin
795
binding sites
663
gene expression
167
differential activity
141
eQTL
121
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2463
February, 2021
1540
September, 2022
373
May, 2021
371
February, 2024
329
November, 2021
283
September, 2023
262
June, 2020
131
May, 2020
128
August, 2021
93
October, 2022
90
March, 2020
88
January, 2022
70
March, 2023
56
January, 2021
53
January, 2020
44
February, 2020
29
March, 2024
22
November, 2022
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
8
February, 2023
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5482
bed bed3+
831
tsv
487
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6466
Homo sapiens
Biosample type
2223
primary cell
2086
cell line
1784
tissue
416
in vitro differentiated cells
2
stem cell
Organ
896
epithelium
575
kidney
412
connective tissue
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5808
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5571
hg19
909
GRCh38
4
hg18
organ_slims!
brain
eye
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6513 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 431 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
+ See 747 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 196 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 117 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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