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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1543
candidate regulatory elements
1270
target gene predictions
928
histone modifications
866
accessible chromatin
chromatin state
798
binding sites
662
gene expression
167
differential activity
137
eQTL
123
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2468
February, 2021
1542
September, 2022
372
February, 2024
372
May, 2021
331
November, 2021
283
September, 2023
264
June, 2020
133
May, 2020
128
August, 2021
94
October, 2022
89
March, 2020
85
January, 2022
70
March, 2023
56
January, 2021
55
January, 2020
46
February, 2020
44
November, 2022
32
February, 2023
27
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5543
bed bed3+
829
tsv
522
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6522
Homo sapiens
Biosample type
2237
primary cell
2089
cell line
1817
tissue
422
in vitro differentiated cells
2
stem cell
Organ
896
epithelium
575
kidney
410
connective tissue
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5864
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5632
hg19
911
GRCh38
4
hg18
organ_slims!
brain
gonad
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6569 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 433 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
+ See 749 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 198 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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