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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1536
candidate regulatory elements
959
target gene predictions
818
histone modifications
790
binding sites
607
gene expression
468
accessible chromatin
134
differential activity
112
variant allelic effects
65
chromatin state
35
eQTL
6
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2438
February, 2021
1522
September, 2022
283
September, 2023
264
June, 2020
248
May, 2021
145
February, 2024
123
May, 2020
93
October, 2022
87
August, 2021
48
March, 2020
44
November, 2022
43
May, 2022
36
January, 2021
32
February, 2020
29
March, 2024
26
August, 2017
25
February, 2023
23
March, 2023
19
April, 2020
9
January, 2020
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
January, 2022
1
July, 2020
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4716
bed bed3+
703
tsv
140
bigWig
108
txt
34
bed bed9+
21
csv
7
bigBed bed9
5
bed bed9
2
bigBed narrowPeak
1
bam
Organism
5503
Homo sapiens
Biosample type
1891
cell line
1638
primary cell
1617
tissue
399
in vitro differentiated cells
3
stem cell
Organ
715
epithelium
547
kidney
338
connective tissue
brain
279
musculature of body
231
lung
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
5199
AMP
281
KPMP
37
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6355
hg19
GRCh38
4
hg18
organ_slims!
brain
pancreas
assembly!
GRCh38
BIOSAMPLE
TYPE
5550 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
H1-hESC
1
2
1
2
8
1
+ See 738 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
15
5
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 361 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
1
3
kidney
29
14
2
1
7
1
1
1
lung
33
17
1
muscle of arm
33
16
1
+ See 172 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
4
4
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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