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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
gene expression
195
accessible chromatin
116
target gene predictions
93
candidate regulatory elements
89
differential activity
49
chromatin state
36
variant allelic effects
34
binding sites
23
histone modifications
3
eQTL
2
caQTL
Date released
186
February, 2021
155
September, 2023
139
September, 2022
123
November, 2021
48
February, 2024
34
March, 2023
33
May, 2021
23
June, 2020
20
August, 2021
20
January, 2021
15
November, 2022
12
February, 2023
11
January, 2020
11
May, 2020
9
February, 2020
7
April, 2020
6
August, 2018
5
October, 2019
5
October, 2022
3
August, 2017
2
March, 2020
2
March, 2024
2
May, 2022
1
November, 2019
Available data
498
bed bed3+
304
tsv
156
bigWig
78
txt
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
872
Homo sapiens
Biosample type
752
primary cell
61
tissue
40
cell line
19
in vitro differentiated cells
Organ
949
epithelium
652
kidney
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
565
AMP
155
KPMP
123
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
547
hg19
196
GRCh38
organ_slims!
brain
liver
BIOSAMPLE
TYPE
872 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
foreskin keratinocyte
4
11
4
+ See 140 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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