Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
9
histone modifications
8
eQTL
7
accessible chromatin
6
binding sites
5
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
40
September, 2022
19
February, 2021
7
August, 2021
6
March, 2020
4
February, 2024
3
August, 2017
3
June, 2020
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2020
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
63
bed bed3+
12
bed bed9
10
tsv
3
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
93
Homo sapiens
Biosample type
58
tissue
primary cell
28
cell line
7
in vitro differentiated cells
Organ
brain
343
kidney
325
musculature of body
277
lung
266
intestine
243
limb
224
heart
209
bodily fluid
198
blood
193
embryo
177
connective tissue
168
large intestine
151
pancreas
130
epithelium
108
stomach
106
extraembryonic component
104
skin of body
vasculature
93
liver
90
blood vessel
88
adipose tissue
86
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
41
mammary gland
39
spinal cord
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
93
AMP
Genome assembly (visualization)
84
hg19
24
GRCh38
2
hg18
organ_slims!
brain
vasculature
biosample_type!
primary cell
BIOSAMPLE
TYPE
93 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
eQTL
accessible chromatin
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
9
2
7
4
1
1
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
3
2
5
2
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download