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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
17
chromatin state
14
histone modifications
13
accessible chromatin
8
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
84
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
131
Homo sapiens
Biosample type
57
tissue
41
primary cell
26
cell line
7
in vitro differentiated cells
Organ
924
epithelium
637
kidney
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
128
AMP
3
ENCODE
Genome assembly (visualization)
107
hg19
44
GRCh38
2
hg18
organ_slims!
brain
vasculature
month_released!
June, 2020
BIOSAMPLE
TYPE
131 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
histone modifications
accessible chromatin
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
9
2
3
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
1
4
7
1
2
hepatic stellate cell
1
1
1
1
1
2
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
5
1
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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