Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1610
candidate regulatory elements
1270
target gene predictions
965
histone modifications
914
chromatin state
898
accessible chromatin
802
binding sites
673
gene expression
171
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
805
September, 2022
134
May, 2021
123
February, 2024
115
March, 2020
110
November, 2021
28
January, 2021
18
May, 2020
5
September, 2023
2
February, 2021
2
March, 2023
1
January, 2020
1
January, 2022
Available data
1270
bed bed3+
72
tsv
3
bigBed narrowPeak
3
bigWig
Organism
1344
Homo sapiens
Biosample type
584
tissue
364
primary cell
335
cell line
58
in vitro differentiated cells
3
stem cell
Organ
122
epithelium
112
brain
86
musculature of body
84
connective tissue
embryo
78
lung
75
kidney
73
intestine
58
heart
58
limb
58
uterus
57
bodily fluid
55
blood
49
pancreas
44
large intestine
44
skin of body
40
vasculature
36
extraembryonic component
34
blood vessel
30
stomach
24
liver
23
small intestine
21
adrenal gland
19
adipose tissue
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
artery
14
thymus
13
ureter
12
spinal cord
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
8
spleen
7
ovary
6
lymphoid tissue
6
nerve
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
bronchus
3
lymphatic vessel
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
1206
AMP
110
ENCODE
28
T1D
Genome assembly (visualization)
1342
hg19
305
GRCh38
organ_slims!
bronchus
embryo
BIOSAMPLE
TYPE
1344 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
Fine-mapped variants
tissue
stomach
21
heart
20
adrenal gland
17
lung
17
small intestine
17
+ See 118 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 166 more…
cell line
HeLa-S3
55
K562
23
A549
19
HFFc6
19
pituitary stalk
10
+ See 153 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 22 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download