Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
481
accessible chromatin
478
gene expression
369
target gene predictions
324
candidate regulatory elements
209
histone modifications
195
chromatin state
152
differential activity
98
binding sites
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
450
February, 2021
331
November, 2021
281
September, 2023
256
May, 2021
96
February, 2024
63
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
30
October, 2022
23
January, 2020
18
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1506
bed bed3+
589
tsv
404
bigWig
162
bed bed9
108
txt
27
bed bed9+
12
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2328
Homo sapiens
Biosample type
2604
tissue
2373
primary cell
2348
cell line
464
in vitro differentiated cells
4
stem cell
Organ
780
epithelium
303
kidney
270
connective tissue
160
vasculature
119
pancreas
111
blood vessel
99
skin of body
59
liver
47
musculature of body
45
mammary gland
41
penis
40
extraembryonic component
33
lung
31
heart
29
artery
28
brain
22
embryo
22
eye
20
intestine
19
vein
17
lymphatic vessel
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1684
AMP
331
ENCODE
281
KPMP
59
T1D
18
LungMap
Genome assembly (visualization)
1712
hg19
703
GRCh38
organ_slims!
bronchus
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
2373 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
1
2
+ See 437 more…
See all biosamples
Download