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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
11
target gene predictions
10
accessible chromatin
6
binding sites
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
67
bed bed3+
3
bigWig
2
tsv
Organism
71
Homo sapiens
Biosample type
46
tissue
19
cell line
6
primary cell
Organ
771
epithelium
421
kidney
315
connective tissue
238
brain
227
pancreas
184
vasculature
164
musculature of body
141
heart
139
blood vessel
123
embryo
118
bodily fluid
117
intestine
114
blood
104
limb
100
liver
97
lung
89
skin of body
78
eye
71
large intestine
69
uterus
64
adipose tissue
50
artery
49
stomach
42
extraembryonic component
41
bone element
40
mammary gland
34
lymph node
32
prostate gland
31
adrenal gland
29
penis
27
small intestine
25
gonad
25
ureter
24
esophagus
22
placenta
19
spinal cord
16
nerve
16
spleen
16
vein
15
thymus
14
lymphatic vessel
13
testis
12
pituitary gland
11
ovary
11
thyroid gland
bronchus
9
skeleton
8
bone marrow
8
lymphoid tissue
7
breast
7
mouth
4
tongue
4
urinary bladder
4
vagina
3
trachea
1
nose
1
pericardium
Project
65
AMP
6
ENCODE
Genome assembly (visualization)
67
hg19
10
GRCh38
organ_slims!
bronchus
month_released!
September, 2022
annotation_type!
histone modifications
BIOSAMPLE
TYPE
71 results
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candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
chromatin state
eQTL
gene expression
tissue
large intestine
15
1
1
sigmoid colon
5
2
1
transverse colon
4
1
1
1
colonic mucosa
2
1
mucosa of rectum
2
1
+ See 7 more…
cell line
HCT-116 cell
1
1
2
HT-29
1
1
1
1
HCT116
1
2
RKO
1
1
1
SW480
1
1
1
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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