Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1536
candidate regulatory elements
1264
target gene predictions
927
histone modifications
866
accessible chromatin
859
chromatin state
798
binding sites
664
gene expression
167
differential activity
142
eQTL
122
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
760
September, 2022
34
May, 2022
29
August, 2017
8
April, 2019
5
February, 2024
5
January, 2020
5
May, 2019
5
May, 2021
5
October, 2019
3
May, 2020
Available data
790
bed bed9
34
bed bed3+
34
bed bed9+
34
bigBed bed9
2
bigWig
1
bam
Organism
859
Homo sapiens
Biosample type
443
tissue
191
primary cell
180
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
859
AMP
Genome assembly (visualization)
859
hg19
790
GRCh38
organ_slims!
bronchus
brain
thymus
BIOSAMPLE
TYPE
859 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
21
stomach
19
kidney
16
lung
16
muscle of arm
16
+ See 88 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 78 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 134 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download