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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1508
candidate regulatory elements
1279
target gene predictions
970
histone modifications
865
chromatin state
860
accessible chromatin
808
binding sites
481
gene expression
165
eQTL
123
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
273
June, 2020
218
November, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
18
April, 2020
15
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
851
bed bed3+
491
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
815
Homo sapiens
Biosample type
458
primary cell
176
tissue
158
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
595
AMP
218
ENCODE
29
T1D
18
LungMap
Genome assembly (visualization)
853
hg19
364
GRCh38
organ_slims!
bronchus
kidney
BIOSAMPLE
TYPE
860 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 197 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
pancreas
5
+ See 84 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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