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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
candidate regulatory elements
57
target gene predictions
46
chromatin state
17
accessible chromatin
15
eQTL
gene expression
8
binding sites
6
Fine-mapped variants
6
histone modifications
3
variant allelic effects
2
differential activity
Date released
122
September, 2022
61
February, 2021
9
March, 2020
8
June, 2020
8
May, 2021
6
August, 2021
6
November, 2021
5
August, 2017
5
February, 2024
5
January, 2022
3
January, 2020
3
May, 2020
2
February, 2020
2
September, 2018
1
November, 2022
1
October, 2022
Available data
186
bed bed3+
41
bed bed9
10
tsv
8
bigWig
1
bigBed bed9
Organism
248
Homo sapiens
Biosample type
204
tissue
37
cell line
6
primary cell
1
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
242
AMP
6
ENCODE
Genome assembly (visualization)
239
hg19
66
GRCh38
2
hg18
organ_slims!
bronchus
annotation_type!
gene expression
BIOSAMPLE
TYPE
248 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
binding sites
Fine-mapped variants
histone modifications
variant allelic effects
differential activity
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
4
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
omental fat pad
5
2
2
2
2
3
+ See 13 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 5 more…
primary cell
colon epithelial cell
3
3
in vitro differentiated cells
white adipose cell
1
See all biosamples
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