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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
candidate regulatory elements
119
target gene predictions
98
accessible chromatin
83
chromatin state
52
gene expression
44
binding sites
34
histone modifications
26
eQTL
17
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
222
September, 2022
170
February, 2021
58
November, 2021
26
June, 2020
19
February, 2024
19
May, 2021
17
September, 2023
14
October, 2022
12
March, 2020
11
August, 2021
11
January, 2020
10
February, 2020
10
January, 2022
10
May, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
480
bed bed3+
75
bed bed9
72
tsv
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
655
Homo sapiens
Biosample type
348
primary cell
156
tissue
92
cell line
58
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
571
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
575
hg19
172
GRCh38
2
hg18
organ_slims!
bronchus
BIOSAMPLE
TYPE
655 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
2
3
1
2
1
osteoblast
2
2
5
1
2
3
2
+ See 53 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
spinal cord
14
8
1
7
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
+ See 15 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 25 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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