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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1591
candidate regulatory elements
1279
target gene predictions
952
histone modifications
896
chromatin state
825
accessible chromatin
786
binding sites
634
gene expression
153
differential activity
150
eQTL
124
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
825
February, 2021
269
June, 2020
190
November, 2021
140
May, 2021
56
January, 2020
54
May, 2020
47
August, 2021
43
February, 2024
37
November, 2022
27
January, 2021
25
February, 2023
16
April, 2020
12
November, 2019
12
September, 2022
11
May, 2022
8
October, 2019
4
January, 2022
1
September, 2018
Available data
1766
bed bed3+
473
bigWig
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1732
Homo sapiens
Biosample type
733
cell line
620
primary cell
277
tissue
147
in vitro differentiated cells
Organ
240
epithelium
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1543
AMP
190
ENCODE
28
T1D
16
LungMap
Genome assembly (visualization)
1768
hg19
449
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
1777 results
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Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 508 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
excitatory neuron
12
hepatocyte
4
8
+ See 236 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
heart
1
5
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
T-cell acute lymphoblastic leukemia
5
+ See 69 more…
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