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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1591
candidate regulatory elements
1279
target gene predictions
952
histone modifications
896
chromatin state
825
accessible chromatin
786
binding sites
634
gene expression
153
differential activity
150
eQTL
124
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
269
June, 2020
190
November, 2021
56
January, 2020
54
May, 2020
43
February, 2024
37
November, 2022
31
August, 2021
29
May, 2021
27
January, 2021
25
February, 2023
16
April, 2020
12
November, 2019
11
May, 2022
10
February, 2021
8
October, 2019
6
September, 2022
4
January, 2022
1
March, 2023
1
September, 2018
Available data
816
bed bed3+
473
bigWig
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
785
Homo sapiens
Biosample type
425
primary cell
191
tissue
157
cell line
57
in vitro differentiated cells
Organ
212
epithelium
connective tissue
67
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
596
AMP
190
ENCODE
28
T1D
16
LungMap
Genome assembly (visualization)
820
hg19
344
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
830 results
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Clear Filters
accessible chromatin
sQTL
primary cell
monocyte
18
1
endothelial cell
15
excitatory neuron
12
macrophage
12
smooth muscle cell
9
+ See 195 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
4
B cell
2
+ See 26 more…
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